WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R02D3.1b Sequence Name  R02D3.1b
Length (nt)  2859   Chromosome Location  IV: 245197-245300
Chromosome . Primary Identifier  IV Chromosome Location . Start  245197
Chromosome Location . End  245300
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02D3.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48677 AASS-1, isoform b 105.6 952 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00051122
WBRNAi00017312
WBRNAi00034526

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R02D3.1b 245197 245300 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019819 aass-1 R02D3.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:R02D3.1b 245197 245300 1
CDS:R02D3.1b 246249 246549 1
CDS:R02D3.1b 246601 246979 1
CDS:R02D3.1b 247026 247153 1
CDS:R02D3.1b 248584 248691 1
CDS:R02D3.1b 248768 248821 1
CDS:R02D3.1b 248926 249332 1
CDS:R02D3.1b 249903 250139 1
CDS:R02D3.1b 250375 250506 1
CDS:R02D3.1b 250555 250993 1
CDS:R02D3.1b 251041 251374 1
CDS:R02D3.1b 251483 251718 1

1 Sequence

Length
2859

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R02D3.1b.1 R02D3.1b.1 3119   IV: 245143-251924