WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21D12.9a.2 Sequence Name  T21D12.9a.2
Length (nt)  2936   Chromosome Location  IV: 274420-279943
Chromosome . Primary Identifier  IV Chromosome Location . Start  274420
Chromosome Location . End  279943 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21D12.9a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020649 sma-10 T21D12.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21D12.9a T21D12.9a 2646   IV: 274626-274867

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21D12.9a.2 274420 279943 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110707   138   IV: 274420-274557 Caenorhabditis elegans
Exon110709   266   IV: 274602-274867 Caenorhabditis elegans
Exon110712   72   IV: 275116-275187 Caenorhabditis elegans
Exon110715   75   IV: 275541-275615 Caenorhabditis elegans
Exon110718   138   IV: 275661-275798 Caenorhabditis elegans
Exon110721   144   IV: 275843-275986 Caenorhabditis elegans
Exon110724   216   IV: 276045-276260 Caenorhabditis elegans
Exon110727   213   IV: 276385-276597 Caenorhabditis elegans
Exon110730   228   IV: 276650-276877 Caenorhabditis elegans
Exon110733   505   IV: 276925-277429 Caenorhabditis elegans
Exon110736   286   IV: 277842-278127 Caenorhabditis elegans
Exon110740   297   IV: 278242-278538 Caenorhabditis elegans
Exon110742   133   IV: 279526-279658 Caenorhabditis elegans
Exon110746   225   IV: 279719-279943 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21D12.9a.2 274420 279943 1

1 Sequence

Length
2936

1 Sequence Ontology Term

Identifier Name Description
transcript