WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T21D12.9a Sequence Name  T21D12.9a
Length (nt)  2646   Chromosome Location  IV: 274626-274867
Chromosome . Primary Identifier  IV Chromosome Location . Start  274626
Chromosome Location . End  274867
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21D12.9a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28415 SMA-10, isoform a 99.5 881 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00001889
WBRNAi00053735
WBRNAi00018979
WBRNAi00026344
WBRNAi00027478
WBRNAi00001368

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T21D12.9a 274626 274867 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020649 sma-10 T21D12.9 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:T21D12.9a 274626 274867 1
CDS:T21D12.9a 275116 275187 1
CDS:T21D12.9a 275541 275615 1
CDS:T21D12.9a 275661 275798 1
CDS:T21D12.9a 275843 275986 1
CDS:T21D12.9a 276045 276260 1
CDS:T21D12.9a 276385 276597 1
CDS:T21D12.9a 276650 276877 1
CDS:T21D12.9a 276925 277429 1
CDS:T21D12.9a 277842 278127 1
CDS:T21D12.9a 278242 278538 1
CDS:T21D12.9a 279526 279658 1
CDS:T21D12.9a 279719 279815 1

1 Sequence

Length
2646

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T21D12.9a.2 T21D12.9a.2 2936   IV: 274420-279943
Transcript:T21D12.9a.1 T21D12.9a.1 2795   IV: 274602-279940