WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F18F11.3e Sequence Name  F18F11.3e
Length (nt)  4917   Chromosome Location  IV: 339808-339868
Chromosome . Primary Identifier  IV Chromosome Location . Start  339808
Chromosome Location . End  339868
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18F11.3e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48897 CDH-8, isoform e 180.5 1638 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00044964
WBRNAi00057962
WBRNAi00013522
WBRNAi00013523
WBRNAi00021256

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F18F11.3e 339808 339868 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017576 cdh-8 F18F11.3 Caenorhabditis elegans

26 Locations


Feature . Primary Identifier
Start End Strand
CDS:F18F11.3e 339808 339868 1
CDS:F18F11.3e 340335 340435 1
CDS:F18F11.3e 341136 341228 1
CDS:F18F11.3e 345173 345259 1
CDS:F18F11.3e 345645 345797 1
CDS:F18F11.3e 345847 345938 1
CDS:F18F11.3e 345985 346092 1
CDS:F18F11.3e 346822 347143 1
CDS:F18F11.3e 347195 347302 1
CDS:F18F11.3e 348814 348942 1
CDS:F18F11.3e 350578 350902 1
CDS:F18F11.3e 351591 351715 1
CDS:F18F11.3e 351761 351982 1
CDS:F18F11.3e 352778 353149 1
CDS:F18F11.3e 353962 354326 1
CDS:F18F11.3e 354412 354606 1
CDS:F18F11.3e 354656 354826 1
CDS:F18F11.3e 354870 355470 1
CDS:F18F11.3e 355936 356028 1
CDS:F18F11.3e 356285 356494 1
CDS:F18F11.3e 356545 356799 1
CDS:F18F11.3e 357352 357495 1
CDS:F18F11.3e 357541 357629 1
CDS:F18F11.3e 357731 357971 1
CDS:F18F11.3e 358550 358698 1
CDS:F18F11.3e 358777 358882 1

1 Sequence

Length
4917

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F18F11.3e.1 F18F11.3e.1 4917   IV: 339808-358882