WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07A9.3 Sequence Name  T07A9.3
Length (nt)  1173   Chromosome Location  IV: 405948-406091
Chromosome . Primary Identifier  IV Chromosome Location . Start  405948
Chromosome Location . End  406091
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07A9.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29466 KGB-1 45.1 390 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00113176
WBRNAi00052702
WBRNAi00018330
WBRNAi00102212
WBRNAi00035285
WBRNAi00077219
WBRNAi00077222
WBRNAi00077225
WBRNAi00112946
WBRNAi00113147
WBRNAi00113093
WBRNAi00102195
WBRNAi00102219
WBRNAi00087941
WBRNAi00117987
WBRNAi00088789
WBRNAi00088592
WBRNAi00088699
WBRNAi00078450
WBRNAi00075977
WBRNAi00102225
WBRNAi00102224
WBRNAi00116173
WBRNAi00102194
WBRNAi00102193

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07A9.3 405948 406091 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002187 kgb-1 T07A9.3 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07A9.3 405948 406091 -1
CDS:T07A9.3 406150 406256 -1
CDS:T07A9.3 406303 406563 -1
CDS:T07A9.3 406733 406904 -1
CDS:T07A9.3 406954 407038 -1
CDS:T07A9.3 407747 407862 -1
CDS:T07A9.3 407906 408035 -1
CDS:T07A9.3 408686 408777 -1
CDS:T07A9.3 408821 408886 -1

1 Sequence

Length
1173

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07A9.3.1 T07A9.3.1 1587   IV: 405621-410033
Transcript:T07A9.3.3 T07A9.3.3 1511   IV: 405622-408898
Transcript:T07A9.3.2 T07A9.3.2 1620   IV: 405622-410035