WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03G1.6a.1 Sequence Name  W03G1.6a.1
Length (nt)  2439   Chromosome Location  IV: 506731-519456
Chromosome . Primary Identifier  IV Chromosome Location . Start  506731
Chromosome Location . End  519456 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03G1.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021012 pig-1 W03G1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03G1.6a W03G1.6a 2112   IV: 507058-507147

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03G1.6a.1 506731 519456 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111739   417   IV: 506731-507147 Caenorhabditis elegans
Exon111767   341   IV: 513836-514176 Caenorhabditis elegans
Exon111771   183   IV: 514531-514713 Caenorhabditis elegans
Exon111779   94   IV: 515219-515312 Caenorhabditis elegans
Exon111787   363   IV: 515989-516351 Caenorhabditis elegans
Exon111795   201   IV: 517251-517451 Caenorhabditis elegans
Exon111807   168   IV: 517502-517669 Caenorhabditis elegans
Exon111811   411   IV: 518637-519047 Caenorhabditis elegans
Exon111815   117   IV: 519102-519218 Caenorhabditis elegans
Exon111819   83   IV: 519265-519347 Caenorhabditis elegans
Exon111823   61   IV: 519396-519456 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03G1.6a.1 506731 519456 -1

1 Sequence

Length
2439

1 Sequence Ontology Term

Identifier Name Description
transcript