WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W03G1.6a Sequence Name  W03G1.6a
Length (nt)  2112   Chromosome Location  IV: 507058-507147
Chromosome . Primary Identifier  IV Chromosome Location . Start  507058
Chromosome Location . End  507147
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03G1.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40473 PIG-1, isoform a 80.0 703 Caenorhabditis elegans
 

Other

17 RNAi

WormBase ID
WBRNAi00083107
WBRNAi00086779
WBRNAi00000253
WBRNAi00054717
WBRNAi00019573
WBRNAi00116284
WBRNAi00036247
WBRNAi00083095
WBRNAi00097785
WBRNAi00115606
WBRNAi00098422
WBRNAi00098442
WBRNAi00098444
WBRNAi00098443
WBRNAi00115607
WBRNAi00115715
WBRNAi00115702

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W03G1.6a 507058 507147 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021012 pig-1 W03G1.6 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:W03G1.6a 507058 507147 -1
CDS:W03G1.6a 513836 514176 -1
CDS:W03G1.6a 514531 514713 -1
CDS:W03G1.6a 515219 515312 -1
CDS:W03G1.6a 515989 516351 -1
CDS:W03G1.6a 517251 517451 -1
CDS:W03G1.6a 517502 517669 -1
CDS:W03G1.6a 518637 519047 -1
CDS:W03G1.6a 519102 519218 -1
CDS:W03G1.6a 519265 519347 -1
CDS:W03G1.6a 519396 519456 -1

1 Sequence

Length
2112

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W03G1.6a.1 W03G1.6a.1 2439   IV: 506731-519456