Other
58 Allele
| Public Name |
|---|
| gk963722 |
| gk963025 |
| gk963557 |
| gk963558 |
| gk964114 |
| gk964115 |
| WBVar01647220 |
| WBVar01647221 |
| gk318742 |
| gk516062 |
| gk353227 |
| gk822805 |
| gk715272 |
| gk588870 |
| gk829479 |
| gk523651 |
| WBVar01818438 |
| WBVar01818437 |
| WBVar01818436 |
| WBVar01450232 |
| WBVar01818431 |
| WBVar01450231 |
| WBVar01818430 |
| WBVar01608401 |
| WBVar01608402 |
| WBVar01818429 |
| WBVar01450233 |
| WBVar01818428 |
| WBVar01608403 |
| WBVar01818435 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_753317..753730 | 414 | IV: 753317-753730 | Caenorhabditis elegans |
4 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type. | DESeq2, fold change > 2, FDR < 0.05. | WBPaper00066485:ogt-1(ok1474)_downregulated_neuron | |
| Transcripts that showed increased expression in smg-1(r910) and smg-1(r910) smg-2(r915) mutants comparing to in N2, and their mRNAs co-purify with SMG-2. | edgeR | WBPaper00053308:SMG-2_associated_NMD(-)_upregulated_ClassI | |
| Single-cell RNA-Seq cell group 25_1 expressed in neuron. | scVI 0.6.0 | WBPaper00065841:25_1 | |
| Single-cell RNA-Seq cell group 108_0 expressed in neuron. | scVI 0.6.0 | WBPaper00065841:108_0 |
1 Expression Patterns
| Remark | Reporter Gene | Primary Identifier | Pattern | Subcellular Localization |
|---|---|---|---|---|
| Expr1160986 | Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/hashimshony2015 |