WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53H1.4b Sequence Name  F53H1.4b
Length (nt)  3720   Chromosome Location  IV: 1310635-1310659
Chromosome . Primary Identifier  IV Chromosome Location . Start  1310635
Chromosome Location . End  1310659
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H1.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48578 F53H1.4, isoform b 143.1 1239 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00048187
WBRNAi00015544
WBRNAi00113486

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F53H1.4b 1310635 1310659 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018778 F53H1.4 F53H1.4 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F53H1.4b 1310635 1310659 1
CDS:F53H1.4b 1310742 1310798 1
CDS:F53H1.4b 1310897 1311077 1
CDS:F53H1.4b 1312127 1312400 1
CDS:F53H1.4b 1313021 1313416 1
CDS:F53H1.4b 1315287 1315523 1
CDS:F53H1.4b 1316880 1317131 1
CDS:F53H1.4b 1318078 1318587 1
CDS:F53H1.4b 1320135 1320425 1
CDS:F53H1.4b 1321063 1321166 1
CDS:F53H1.4b 1322092 1322372 1
CDS:F53H1.4b 1323186 1323464 1
CDS:F53H1.4b 1324948 1325501 1
CDS:F53H1.4b 1327379 1327657 1

1 Sequence

Length
3720

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53H1.4b.1 F53H1.4b.1 4342   IV: 1310598-1328242