WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54E4.1.1 Sequence Name  C54E4.1.1
Length (nt)  760   Chromosome Location  IV: 2175591-2177586
Chromosome . Primary Identifier  IV Chromosome Location . Start  2175591
Chromosome Location . End  2177586 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54E4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016917 C54E4.1 C54E4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54E4.1 C54E4.1 738   IV: 2175606-2175789

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54E4.1.1 2175591 2177586 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114637   199   IV: 2175591-2175789 Caenorhabditis elegans
Exon114638   93   IV: 2175918-2176010 Caenorhabditis elegans
Exon114639   224   IV: 2176377-2176600 Caenorhabditis elegans
Exon114643   244   IV: 2177343-2177586 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54E4.1.1 2175591 2177586 1

1 Sequence

Length
760

1 Sequence Ontology Term

Identifier Name Description
transcript