WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C54E4.1 Sequence Name  C54E4.1
Length (nt)  738   Chromosome Location  IV: 2175606-2175789
Chromosome . Primary Identifier  IV Chromosome Location . Start  2175606
Chromosome Location . End  2175789
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54E4.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16943 C54E4.1 26.7 245 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00043154
WBRNAi00012396
WBRNAi00030145

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C54E4.1 2175606 2175789 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016917 C54E4.1 C54E4.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:C54E4.1 2175606 2175789 1
CDS:C54E4.1 2175918 2176010 1
CDS:C54E4.1 2176377 2176600 1
CDS:C54E4.1 2177343 2177579 1

1 Sequence

Length
738

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C54E4.1.1 C54E4.1.1 760   IV: 2175591-2177586