WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38F2AR.12a Sequence Name  Y38F2AR.12a
Length (nt)  3774   Chromosome Location  IV: 2399560-2399619
Chromosome . Primary Identifier  IV Chromosome Location . Start  2399560
Chromosome Location . End  2399619
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F2AR.12a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48219 Y38F2AR.12, isoform a 137.5 1257 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056048
WBRNAi00020300
WBRNAi00020308

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38F2AR.12a 2399560 2399619 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021430 Y38F2AR.12 Y38F2AR.12 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38F2AR.12a 2399560 2399619 -1
CDS:Y38F2AR.12a 2399828 2399948 -1
CDS:Y38F2AR.12a 2400271 2400590 -1
CDS:Y38F2AR.12a 2400906 2401385 -1
CDS:Y38F2AR.12a 2401717 2401884 -1
CDS:Y38F2AR.12a 2402468 2402800 -1
CDS:Y38F2AR.12a 2403051 2403152 -1
CDS:Y38F2AR.12a 2403911 2404482 -1
CDS:Y38F2AR.12a 2408137 2408404 -1
CDS:Y38F2AR.12a 2409377 2409566 -1
CDS:Y38F2AR.12a 2409614 2409937 -1
CDS:Y38F2AR.12a 2410686 2410931 -1
CDS:Y38F2AR.12a 2411691 2412075 -1
CDS:Y38F2AR.12a 2412206 2412410 -1

1 Sequence

Length
3774

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38F2AR.12a.1 Y38F2AR.12a.1 3860   IV: 2399484-2412420