WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54G2A.39b Sequence Name  Y54G2A.39b
Length (nt)  1029   Chromosome Location  IV: 2825376-2825476
Chromosome . Primary Identifier  IV Chromosome Location . Start  2825376
Chromosome Location . End  2825476
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.39b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27497 CLEC-80, isoform b 36.8 342 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00057474

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54G2A.39b 2825376 2825476 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00043062 clec-80 Y54G2A.39 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54G2A.39b 2825376 2825476 1
CDS:Y54G2A.39b 2825526 2825647 1
CDS:Y54G2A.39b 2826317 2826571 1
CDS:Y54G2A.39b 2826630 2826709 1
CDS:Y54G2A.39b 2827441 2827634 1
CDS:Y54G2A.39b 2827683 2827760 1
CDS:Y54G2A.39b 2827818 2828016 1

1 Sequence

Length
1029

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54G2A.39b.1 Y54G2A.39b.1 1086   IV: 2825372-2828069