WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:F42A6.9 Sequence Name  F42A6.9
Length (nt)  2511   Chromosome Location  IV: 3342757-3342928
Chromosome . Primary Identifier  IV Chromosome Location . Start  3342757
Chromosome Location . End  3342928
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A6.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28392 ELKS-1 95.4 836 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00002391
WBRNAi00047069
WBRNAi00014804
WBRNAi00033487

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F42A6.9 3342757 3342928 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018330 elks-1 F42A6.9 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F42A6.9 3342757 3342928 -1
CDS:F42A6.9 3344332 3344475 -1
CDS:F42A6.9 3344533 3344648 -1
CDS:F42A6.9 3345433 3345802 -1
CDS:F42A6.9 3346075 3347107 -1
CDS:F42A6.9 3347488 3347596 -1
CDS:F42A6.9 3347645 3347834 -1
CDS:F42A6.9 3348923 3349168 -1
CDS:F42A6.9 3349304 3349424 -1
CDS:F42A6.9 3349909 3349918 -1

1 Sequence

Length
2511

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F42A6.9.1 F42A6.9.1 2862   IV: 3342515-3350027