WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F37C4.3.2 Sequence Name  F37C4.3.2
Length (nt)  2136   Chromosome Location  IV: 3881849-3884688
Chromosome . Primary Identifier  IV Chromosome Location . Start  3881849
Chromosome Location . End  3884688 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F37C4.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018143 oac-23 F37C4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F37C4.3 F37C4.3 2058   IV: 3881852-3881976

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F37C4.3.2 3881849 3884688 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117943   128   IV: 3881849-3881976 Caenorhabditis elegans
Exon117946   265   IV: 3882027-3882291 Caenorhabditis elegans
Exon117948   139   IV: 3882439-3882577 Caenorhabditis elegans
Exon117950   87   IV: 3882625-3882711 Caenorhabditis elegans
Exon117952   244   IV: 3882754-3882997 Caenorhabditis elegans
Exon117954   167   IV: 3883079-3883245 Caenorhabditis elegans
Exon117956   338   IV: 3883290-3883627 Caenorhabditis elegans
Exon117958   127   IV: 3883729-3883855 Caenorhabditis elegans
Exon117960   112   IV: 3883909-3884020 Caenorhabditis elegans
Exon117962   211   IV: 3884065-3884275 Caenorhabditis elegans
Exon117964   318   IV: 3884371-3884688 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F37C4.3.2 3881849 3884688 1

1 Sequence

Length
2136

1 Sequence Ontology Term

Identifier Name Description
transcript