WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C35B1.2c.2 Sequence Name  C35B1.2c.2
Length (nt)  2388   Chromosome Location  IV: 4086225-4102905
Chromosome . Primary Identifier  IV Chromosome Location . Start  4086225
Chromosome Location . End  4102905 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C35B1.2c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016432 C35B1.2 C35B1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C35B1.2c C35B1.2c 1449   IV: 4086225-4086291

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C35B1.2c.2 4086225 4102905 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118478   67   IV: 4086225-4086291 Caenorhabditis elegans
Exon118481   62   IV: 4086380-4086441 Caenorhabditis elegans
Exon118484   86   IV: 4086498-4086583 Caenorhabditis elegans
Exon118487   134   IV: 4086634-4086767 Caenorhabditis elegans
Exon118490   102   IV: 4086841-4086942 Caenorhabditis elegans
Exon118493   248   IV: 4088640-4088887 Caenorhabditis elegans
Exon118496   70   IV: 4089219-4089288 Caenorhabditis elegans
Exon118499   128   IV: 4090029-4090156 Caenorhabditis elegans
Exon118502   101   IV: 4090730-4090830 Caenorhabditis elegans
Exon118505   232   IV: 4098078-4098309 Caenorhabditis elegans
Exon118508   1073   IV: 4100935-4102007 Caenorhabditis elegans
Exon118514   85   IV: 4102821-4102905 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C35B1.2c.2 4086225 4102905 1

1 Sequence

Length
2388

1 Sequence Ontology Term

Identifier Name Description
transcript