WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03B1.7c.4 Sequence Name  W03B1.7c.4
Length (nt)  1590   Chromosome Location  IV: 4338400-4341303
Chromosome . Primary Identifier  IV Chromosome Location . Start  4338400
Chromosome Location . End  4341303 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03B1.7c.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020976 oac-51 W03B1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03B1.7c W03B1.7c 1401   IV: 4338622-4338800

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03B1.7c.4 4338400 4341303 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118990   148   IV: 4338400-4338547 Caenorhabditis elegans
Exon118997   181   IV: 4338620-4338800 Caenorhabditis elegans
Exon119003   167   IV: 4338858-4339024 Caenorhabditis elegans
Exon119010   341   IV: 4339499-4339839 Caenorhabditis elegans
Exon119017   127   IV: 4339987-4340113 Caenorhabditis elegans
Exon119024   112   IV: 4340160-4340271 Caenorhabditis elegans
Exon119031   211   IV: 4340745-4340955 Caenorhabditis elegans
Exon119038   303   IV: 4341001-4341303 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03B1.7c.4 4338400 4341303 1

1 Sequence

Length
1590

1 Sequence Ontology Term

Identifier Name Description
transcript