WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W03B1.7c Sequence Name  W03B1.7c
Length (nt)  1401   Chromosome Location  IV: 4338622-4338800
Chromosome . Primary Identifier  IV Chromosome Location . Start  4338622
Chromosome Location . End  4338800
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03B1.7c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48657 OAC-51, isoform c 53.4 466 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00054658
WBRNAi00019541
WBRNAi00019542
WBRNAi00036218

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W03B1.7c 4338622 4338800 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020976 oac-51 W03B1.7 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:W03B1.7c 4338622 4338800 1
CDS:W03B1.7c 4338858 4339024 1
CDS:W03B1.7c 4339499 4339839 1
CDS:W03B1.7c 4339987 4340113 1
CDS:W03B1.7c 4340160 4340271 1
CDS:W03B1.7c 4340745 4340955 1
CDS:W03B1.7c 4341001 4341264 1

1 Sequence

Length
1401

1 Sequence Ontology Term

Identifier Name Description
CDS  

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W03B1.7c.1 W03B1.7c.1 2143   IV: 4336801-4341303
Transcript:W03B1.7c.2 W03B1.7c.2 2134   IV: 4336818-4341272
Transcript:W03B1.7c.3 W03B1.7c.3 2002   IV: 4337476-4341288
Transcript:W03B1.7c.4 W03B1.7c.4 1590   IV: 4338400-4341303
Transcript:W03B1.7c.5 W03B1.7c.5 1603   IV: 4338420-4341264