WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55F10.1b.1 Sequence Name  F55F10.1b.1
Length (nt)  13102   Chromosome Location  IV: 4360837-4386251
Chromosome . Primary Identifier  IV Chromosome Location . Start  4360837
Chromosome Location . End  4386251 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55F10.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018898 F55F10.1 F55F10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55F10.1b F55F10.1b 13089   IV: 4360850-4361015

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F55F10.1b.1 4360837 4386251 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119083   179   IV: 4360837-4361015 Caenorhabditis elegans
Exon119086   191   IV: 4361064-4361254 Caenorhabditis elegans
Exon119088   434   IV: 4361305-4361738 Caenorhabditis elegans
Exon119090   133   IV: 4361795-4361927 Caenorhabditis elegans
Exon119092   1578   IV: 4362703-4364280 Caenorhabditis elegans
Exon119094   1199   IV: 4365014-4366212 Caenorhabditis elegans
Exon119096   187   IV: 4367179-4367365 Caenorhabditis elegans
Exon119098   2239   IV: 4367415-4369653 Caenorhabditis elegans
Exon119100   204   IV: 4370703-4370906 Caenorhabditis elegans
Exon119102   256   IV: 4371845-4372100 Caenorhabditis elegans
Exon119104   1207   IV: 4372887-4374093 Caenorhabditis elegans
Exon119106   459   IV: 4374732-4375190 Caenorhabditis elegans
Exon119108   187   IV: 4375835-4376021 Caenorhabditis elegans
Exon119110   887   IV: 4376800-4377686 Caenorhabditis elegans
Exon119112   508   IV: 4378668-4379175 Caenorhabditis elegans
Exon119114   246   IV: 4380038-4380283 Caenorhabditis elegans
Exon119116   2075   IV: 4380334-4382408 Caenorhabditis elegans
Exon119118   336   IV: 4383212-4383547 Caenorhabditis elegans
Exon119121   465   IV: 4384210-4384674 Caenorhabditis elegans
Exon119122   132   IV: 4386120-4386251 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F55F10.1b.1 4360837 4386251 1

1 Sequence

Length
13102

1 Sequence Ontology Term

Identifier Name Description
transcript