WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R08C7.10b Sequence Name  R08C7.10b
Length (nt)  2247   Chromosome Location  IV: 4442626-4442700
Chromosome . Primary Identifier  IV Chromosome Location . Start  4442626
Chromosome Location . End  4442700
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08C7.10b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28750 WAPL-1, isoform b 84.3 748 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00051530
WBRNAi00026063
WBRNAi00034740
WBRNAi00009051

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R08C7.10b 4442626 4442700 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019953 wapl-1 R08C7.10 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:R08C7.10b 4442626 4442700 -1
CDS:R08C7.10b 4442752 4443084 -1
CDS:R08C7.10b 4443417 4443542 -1
CDS:R08C7.10b 4443592 4443666 -1
CDS:R08C7.10b 4443721 4443952 -1
CDS:R08C7.10b 4444001 4444077 -1
CDS:R08C7.10b 4444127 4444215 -1
CDS:R08C7.10b 4444267 4444736 -1
CDS:R08C7.10b 4444782 4444975 -1
CDS:R08C7.10b 4445022 4445176 -1
CDS:R08C7.10b 4445226 4445424 -1
CDS:R08C7.10b 4445464 4445644 -1
CDS:R08C7.10b 4445700 4445740 -1

1 Sequence

Length
2247

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R08C7.10b.1 R08C7.10b.1 2511   IV: 4442362-4445740