WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29B9.2c.1 Sequence Name  F29B9.2c.1
Length (nt)  2790   Chromosome Location  IV: 4661009-4664941
Chromosome . Primary Identifier  IV Chromosome Location . Start  4661009
Chromosome Location . End  4664941 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29B9.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017920 jmjd-1.2 F29B9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29B9.2c F29B9.2c 2790   IV: 4661009-4661191

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29B9.2c.1 4661009 4664941 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119868   183   IV: 4661009-4661191 Caenorhabditis elegans
Exon119871   72   IV: 4661239-4661310 Caenorhabditis elegans
Exon119873   285   IV: 4661357-4661641 Caenorhabditis elegans
Exon119878   403   IV: 4661806-4662208 Caenorhabditis elegans
Exon119881   127   IV: 4662263-4662389 Caenorhabditis elegans
Exon119884   321   IV: 4662748-4663068 Caenorhabditis elegans
Exon119887   232   IV: 4663121-4663352 Caenorhabditis elegans
Exon119890   373   IV: 4663671-4664043 Caenorhabditis elegans
Exon119893   738   IV: 4664098-4664835 Caenorhabditis elegans
Exon119894   56   IV: 4664886-4664941 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29B9.2c.1 4661009 4664941 1

1 Sequence

Length
2790

1 Sequence Ontology Term

Identifier Name Description
transcript