WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H06H21.10d Sequence Name  H06H21.10d
Length (nt)  3900   Chromosome Location  IV: 4828747-4828848
Chromosome . Primary Identifier  IV Chromosome Location . Start  4828747
Chromosome Location . End  4828848
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H06H21.10d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48683 TAT-2, isoform d 146.6 1299 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00078011
WBRNAi00049310
WBRNAi00016205
WBRNAi00097532
WBRNAi00092580
WBRNAi00092587
WBRNAi00077713
WBRNAi00099121

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H06H21.10d 4828747 4828848 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019166 tat-2 H06H21.10 Caenorhabditis elegans

22 Locations


Feature . Primary Identifier
Start End Strand
CDS:H06H21.10d 4828747 4828848 -1
CDS:H06H21.10d 4829370 4829586 -1
CDS:H06H21.10d 4829806 4830134 -1
CDS:H06H21.10d 4830942 4831074 -1
CDS:H06H21.10d 4831469 4831862 -1
CDS:H06H21.10d 4832638 4832788 -1
CDS:H06H21.10d 4832916 4833064 -1
CDS:H06H21.10d 4833110 4833197 -1
CDS:H06H21.10d 4834287 4834430 -1
CDS:H06H21.10d 4834637 4834834 -1
CDS:H06H21.10d 4834891 4835016 -1
CDS:H06H21.10d 4835823 4836245 -1
CDS:H06H21.10d 4837247 4837315 -1
CDS:H06H21.10d 4837452 4837732 -1
CDS:H06H21.10d 4838886 4839263 -1
CDS:H06H21.10d 4839455 4839608 -1
CDS:H06H21.10d 4840116 4840250 -1
CDS:H06H21.10d 4840395 4840493 -1
CDS:H06H21.10d 4840543 4840656 -1
CDS:H06H21.10d 4841017 4841171 -1
CDS:H06H21.10d 4841707 4841763 -1
CDS:H06H21.10d 4846890 4846893 -1

1 Sequence

Length
3900

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H06H21.10d.1 H06H21.10d.1 3900   IV: 4828747-4846893