WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y9C9A.18.1 Sequence Name  Y9C9A.18.1
Length (nt)  1011   Chromosome Location  IV: 4909339-4910962
Chromosome . Primary Identifier  IV Chromosome Location . Start  4909339
Chromosome Location . End  4910962 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y9C9A.18.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006204 str-159 Y9C9A.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y9C9A.18 Y9C9A.18 1011   IV: 4909339-4909530

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y9C9A.18.1 4909339 4910962 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120718   192   IV: 4909339-4909530 Caenorhabditis elegans
Exon120719   94   IV: 4909589-4909682 Caenorhabditis elegans
Exon120720   79   IV: 4909730-4909808 Caenorhabditis elegans
Exon120723   132   IV: 4910138-4910269 Caenorhabditis elegans
Exon120724   139   IV: 4910314-4910452 Caenorhabditis elegans
Exon120725   132   IV: 4910498-4910629 Caenorhabditis elegans
Exon120726   178   IV: 4910675-4910852 Caenorhabditis elegans
Exon120727   65   IV: 4910898-4910962 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y9C9A.18.1 4909339 4910962 1

1 Sequence

Length
1011

1 Sequence Ontology Term

Identifier Name Description
transcript