WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y4C6B.2b.3 Sequence Name  Y4C6B.2b.3
Length (nt)  2354   Chromosome Location  IV: 5340888-5344202
Chromosome . Primary Identifier  IV Chromosome Location . Start  5340888
Chromosome Location . End  5344202 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y4C6B.2b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021156 Y4C6B.2 Y4C6B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y4C6B.2b Y4C6B.2b 531   IV: 5343139-5343148

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y4C6B.2b.3 5340888 5344202 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon121991   294   IV: 5340888-5341181 Caenorhabditis elegans
Exon122006   526   IV: 5341690-5342215 Caenorhabditis elegans
Exon122014   876   IV: 5342273-5343148 Caenorhabditis elegans
Exon122031   273   IV: 5343227-5343499 Caenorhabditis elegans
Exon122040   142   IV: 5343585-5343726 Caenorhabditis elegans
Exon122050   243   IV: 5343960-5344202 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y4C6B.2b.3 5340888 5344202 1

1 Sequence

Length
2354

1 Sequence Ontology Term

Identifier Name Description
transcript