WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y4C6B.2b Sequence Name  Y4C6B.2b
Length (nt)  531   Chromosome Location  IV: 5343139-5343148
Chromosome . Primary Identifier  IV Chromosome Location . Start  5343139
Chromosome Location . End  5343148
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y4C6B.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35096 Y4C6B.2, isoform b 19.3 176 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00037312

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y4C6B.2b 5343139 5343148 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021156 Y4C6B.2 Y4C6B.2 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y4C6B.2b 5343139 5343148 1
CDS:Y4C6B.2b 5343227 5343499 1
CDS:Y4C6B.2b 5343585 5343726 1
CDS:Y4C6B.2b 5343960 5344065 1

1 Sequence

Length
531

1 Sequence Ontology Term

Identifier Name Description
CDS  

7 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y4C6B.2b.1 Y4C6B.2b.1 1759   IV: 5339574-5344204
Transcript:Y4C6B.2b.4 Y4C6B.2b.4 1547   IV: 5340888-5344199
Transcript:Y4C6B.2b.5 Y4C6B.2b.5 1702   IV: 5340888-5344199
Transcript:Y4C6B.2b.6 Y4C6B.2b.6 2408   IV: 5340888-5344199
Transcript:Y4C6B.2b.3 Y4C6B.2b.3 2354   IV: 5340888-5344202
Transcript:Y4C6B.2b.2 Y4C6B.2b.2 1631   IV: 5340888-5344204
Transcript:Y4C6B.2b.7 Y4C6B.2b.7 1524   IV: 5340916-5344199