WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C01G5.8b Sequence Name  C01G5.8b
Length (nt)  1326   Chromosome Location  IV: 6550617-6550711
Chromosome . Primary Identifier  IV Chromosome Location . Start  6550617
Chromosome Location . End  6550711
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01G5.8b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49421 FAN-1, isoform b 51.0 441 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00039348
WBRNAi00028300

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C01G5.8b 6550617 6550711 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015310 fan-1 C01G5.8 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C01G5.8b 6550617 6550711 1
CDS:C01G5.8b 6550759 6551036 1
CDS:C01G5.8b 6551080 6551159 1
CDS:C01G5.8b 6551205 6551511 1
CDS:C01G5.8b 6551821 6552125 1
CDS:C01G5.8b 6552175 6552435 1

1 Sequence

Length
1326

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C01G5.8b.1 C01G5.8b.1 2679   IV: 6548853-6552504
Transcript:C01G5.8b.2 C01G5.8b.2 1405   IV: 6550608-6552505