WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C42D4.8 Sequence Name  C42D4.8
Length (nt)  4203   Chromosome Location  IV: 7160285-7160428
Chromosome . Primary Identifier  IV Chromosome Location . Start  7160285
Chromosome Location . End  7160428
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42D4.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31330 RPC-1 155.7 1400 Caenorhabditis elegans
 

Other

26 RNAi

WormBase ID
WBRNAi00042359
WBRNAi00029751
WBRNAi00099783
WBRNAi00113238
WBRNAi00100374
WBRNAi00100748
WBRNAi00099177
WBRNAi00099581
WBRNAi00099379
WBRNAi00113008
WBRNAi00098715
WBRNAi00098716
WBRNAi00024801
WBRNAi00000547
WBRNAi00008515
WBRNAi00098681
WBRNAi00098680
WBRNAi00106898
WBRNAi00100000
WBRNAi00100187
WBRNAi00098623
WBRNAi00098622
WBRNAi00098647
WBRNAi00098648
WBRNAi00100561
WBRNAi00100935

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C42D4.8 7160285 7160428 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004411 rpc-1 C42D4.8 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:C42D4.8 7160285 7160428 -1
CDS:C42D4.8 7160546 7161234 -1
CDS:C42D4.8 7161620 7161826 -1
CDS:C42D4.8 7161876 7162009 -1
CDS:C42D4.8 7162069 7162951 -1
CDS:C42D4.8 7162998 7163606 -1
CDS:C42D4.8 7163654 7164260 -1
CDS:C42D4.8 7164543 7164788 -1
CDS:C42D4.8 7164834 7165024 -1
CDS:C42D4.8 7165068 7165227 -1
CDS:C42D4.8 7165274 7165423 -1
CDS:C42D4.8 7165470 7165608 -1
CDS:C42D4.8 7165671 7165714 -1

1 Sequence

Length
4203

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C42D4.8.1 C42D4.8.1 4387   IV: 7160135-7165748