WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13A1.4c.1 Sequence Name  R13A1.4c.1
Length (nt)  2337   Chromosome Location  IV: 7198432-7203498
Chromosome . Primary Identifier  IV Chromosome Location . Start  7198432
Chromosome Location . End  7203498 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13A1.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006748 unc-8 R13A1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13A1.4c R13A1.4c 2337   IV: 7198432-7198530

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R13A1.4c.1 7198432 7203498 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129544   99   IV: 7198432-7198530 Caenorhabditis elegans
Exon129550   114   IV: 7199532-7199645 Caenorhabditis elegans
Exon129554   149   IV: 7200161-7200309 Caenorhabditis elegans
Exon129558   143   IV: 7200360-7200502 Caenorhabditis elegans
Exon129562   83   IV: 7200547-7200629 Caenorhabditis elegans
Exon129566   92   IV: 7200686-7200777 Caenorhabditis elegans
Exon129570   139   IV: 7200824-7200962 Caenorhabditis elegans
Exon129574   87   IV: 7201047-7201133 Caenorhabditis elegans
Exon129578   138   IV: 7201176-7201313 Caenorhabditis elegans
Exon129582   102   IV: 7201358-7201459 Caenorhabditis elegans
Exon129586   158   IV: 7201507-7201664 Caenorhabditis elegans
Exon129590   101   IV: 7201709-7201809 Caenorhabditis elegans
Exon129594   161   IV: 7201873-7202033 Caenorhabditis elegans
Exon129598   93   IV: 7202079-7202171 Caenorhabditis elegans
Exon129602   118   IV: 7202216-7202333 Caenorhabditis elegans
Exon129606   144   IV: 7202706-7202849 Caenorhabditis elegans
Exon129610   140   IV: 7202896-7203035 Caenorhabditis elegans
Exon129614   96   IV: 7203172-7203267 Caenorhabditis elegans
Exon129617   180   IV: 7203319-7203498 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R13A1.4c.1 7198432 7203498 1

1 Sequence

Length
2337

1 Sequence Ontology Term

Identifier Name Description
transcript