WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C48A7.1a Sequence Name  C48A7.1a
Length (nt)  5352   Chromosome Location  IV: 7405582-7405588
Chromosome . Primary Identifier  IV Chromosome Location . Start  7405582
Chromosome Location . End  7405588
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48A7.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28820 EGL-19, isoform a 202.6 1783 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00089854
WBRNAi00064260
WBRNAi00002264
WBRNAi00042705
WBRNAi00008534
WBRNAi00024850
WBRNAi00089917
WBRNAi00090077
WBRNAi00090235
WBRNAi00113903

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C48A7.1a 7405582 7405588 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001187 egl-19 C48A7.1 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:C48A7.1a 7405582 7405588 1
CDS:C48A7.1a 7406131 7406222 1
CDS:C48A7.1a 7407983 7408146 1
CDS:C48A7.1a 7408201 7408306 1
CDS:C48A7.1a 7408830 7408969 1
CDS:C48A7.1a 7409023 7410029 1
CDS:C48A7.1a 7410248 7411094 1
CDS:C48A7.1a 7411184 7411307 1
CDS:C48A7.1a 7411354 7412756 1
CDS:C48A7.1a 7413032 7413531 1
CDS:C48A7.1a 7413706 7413810 1
CDS:C48A7.1a 7413959 7414095 1
CDS:C48A7.1a 7414598 7414702 1
CDS:C48A7.1a 7415858 7415966 1
CDS:C48A7.1a 7416146 7416401 1
CDS:C48A7.1a 7417660 7417909 1

1 Sequence

Length
5352

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C48A7.1a.1 C48A7.1a.1 6175   IV: 7405582-7418732