WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55G1.13 Sequence Name  F55G1.13
Length (nt)  2652   Chromosome Location  IV: 7493843-7493974
Chromosome . Primary Identifier  IV Chromosome Location . Start  7493843
Chromosome Location . End  7493974
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55G1.13

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47348 EGAS-4 96.3 883 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00107707
WBRNAi00067202
WBRNAi00067889
WBRNAi00067981
WBRNAi00048535
WBRNAi00048536
WBRNAi00015743
WBRNAi00015744
WBRNAi00032895

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F55G1.13 7493843 7493974 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018906 egas-4 F55G1.13 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:F55G1.13 7493843 7493974 -1
CDS:F55G1.13 7494020 7494148 -1
CDS:F55G1.13 7494613 7494740 -1
CDS:F55G1.13 7494788 7494893 -1
CDS:F55G1.13 7494947 7495042 -1
CDS:F55G1.13 7495088 7495355 -1
CDS:F55G1.13 7495399 7495553 -1
CDS:F55G1.13 7495599 7495663 -1
CDS:F55G1.13 7495709 7495837 -1
CDS:F55G1.13 7495885 7496007 -1
CDS:F55G1.13 7496063 7496188 -1
CDS:F55G1.13 7496246 7496359 -1
CDS:F55G1.13 7496402 7496722 -1
CDS:F55G1.13 7496769 7496846 -1
CDS:F55G1.13 7496891 7497172 -1
CDS:F55G1.13 7497221 7497334 -1
CDS:F55G1.13 7497391 7497634 -1
CDS:F55G1.13 7497800 7497841 -1

1 Sequence

Length
2652

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55G1.13.1 F55G1.13.1 2761   IV: 7493743-7497850