WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55G1.15.1 Sequence Name  F55G1.15.1
Length (nt)  2096   Chromosome Location  IV: 7498053-7501437
Chromosome . Primary Identifier  IV Chromosome Location . Start  7498053
Chromosome Location . End  7501437 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55G1.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018907 F55G1.15 F55G1.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55G1.15 F55G1.15 1848   IV: 7498129-7498182

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55G1.15.1 7498053 7501437 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130965   130   IV: 7498053-7498182 Caenorhabditis elegans
Exon130966   87   IV: 7498232-7498318 Caenorhabditis elegans
Exon130967   220   IV: 7498370-7498589 Caenorhabditis elegans
Exon130968   188   IV: 7498727-7498914 Caenorhabditis elegans
Exon130969   96   IV: 7498960-7499055 Caenorhabditis elegans
Exon130970   117   IV: 7499269-7499385 Caenorhabditis elegans
Exon130973   89   IV: 7499667-7499755 Caenorhabditis elegans
Exon130974   193   IV: 7499804-7499996 Caenorhabditis elegans
Exon130975   243   IV: 7500043-7500285 Caenorhabditis elegans
Exon130976   417   IV: 7500613-7501029 Caenorhabditis elegans
Exon130977   117   IV: 7501075-7501191 Caenorhabditis elegans
Exon130978   199   IV: 7501239-7501437 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55G1.15.1 7498053 7501437 -1

1 Sequence

Length
2096

1 Sequence Ontology Term

Identifier Name Description
transcript