WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45E4.7a.1 Sequence Name  F45E4.7a.1
Length (nt)  2782   Chromosome Location  IV: 7635655-7641858
Chromosome . Primary Identifier  IV Chromosome Location . Start  7635655
Chromosome Location . End  7641858 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E4.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018472 nep-16 F45E4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45E4.7a F45E4.7a 2607   IV: 7635793-7635936

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45E4.7a.1 7635655 7641858 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131349   282   IV: 7635655-7635936 Caenorhabditis elegans
Exon131351   439   IV: 7635980-7636418 Caenorhabditis elegans
Exon131354   345   IV: 7636839-7637183 Caenorhabditis elegans
Exon131358   90   IV: 7637244-7637333 Caenorhabditis elegans
Exon131361   299   IV: 7637381-7637679 Caenorhabditis elegans
Exon131364   114   IV: 7637877-7637990 Caenorhabditis elegans
Exon131367   106   IV: 7638037-7638142 Caenorhabditis elegans
Exon131371   99   IV: 7638356-7638454 Caenorhabditis elegans
Exon131373   94   IV: 7638981-7639074 Caenorhabditis elegans
Exon131375   150   IV: 7639127-7639276 Caenorhabditis elegans
Exon131377   161   IV: 7639321-7639481 Caenorhabditis elegans
Exon131379   232   IV: 7639889-7640120 Caenorhabditis elegans
Exon131382   124   IV: 7640352-7640475 Caenorhabditis elegans
Exon131383   153   IV: 7640735-7640887 Caenorhabditis elegans
Exon131385   94   IV: 7641765-7641858 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45E4.7a.1 7635655 7641858 -1

1 Sequence

Length
2782

1 Sequence Ontology Term

Identifier Name Description
transcript