WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F45E4.7a Sequence Name  F45E4.7a
Length (nt)  2607   Chromosome Location  IV: 7635793-7635936
Chromosome . Primary Identifier  IV Chromosome Location . Start  7635793
Chromosome Location . End  7635936
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E4.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37644 NEP-16, isoform a 99.8 868 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00047411
WBRNAi00047412
WBRNAi00073094
WBRNAi00032307

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F45E4.7a 7635793 7635936 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018472 nep-16 F45E4.7 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:F45E4.7a 7635793 7635936 -1
CDS:F45E4.7a 7635980 7636418 -1
CDS:F45E4.7a 7636839 7637183 -1
CDS:F45E4.7a 7637244 7637333 -1
CDS:F45E4.7a 7637381 7637679 -1
CDS:F45E4.7a 7637877 7637990 -1
CDS:F45E4.7a 7638037 7638142 -1
CDS:F45E4.7a 7638356 7638454 -1
CDS:F45E4.7a 7638981 7639074 -1
CDS:F45E4.7a 7639127 7639276 -1
CDS:F45E4.7a 7639321 7639481 -1
CDS:F45E4.7a 7639889 7640120 -1
CDS:F45E4.7a 7640352 7640475 -1
CDS:F45E4.7a 7640735 7640887 -1
CDS:F45E4.7a 7641765 7641821 -1

1 Sequence

Length
2607

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F45E4.7a.1 F45E4.7a.1 2782   IV: 7635655-7641858