WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08G9.2.1 Sequence Name  C08G9.2.1
Length (nt)  6883   Chromosome Location  IV: 7664157-7672972
Chromosome . Primary Identifier  IV Chromosome Location . Start  7664157
Chromosome Location . End  7672972 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08G9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015620 C08G9.2 C08G9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08G9.2 C08G9.2 6675   IV: 7664272-7664493

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08G9.2.1 7664157 7672972 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131488   337   IV: 7664157-7664493 Caenorhabditis elegans
Exon131489   62   IV: 7664561-7664622 Caenorhabditis elegans
Exon131490   269   IV: 7664671-7664939 Caenorhabditis elegans
Exon131491   127   IV: 7664988-7665114 Caenorhabditis elegans
Exon131492   233   IV: 7665158-7665390 Caenorhabditis elegans
Exon131493   454   IV: 7665440-7665893 Caenorhabditis elegans
Exon131494   198   IV: 7666073-7666270 Caenorhabditis elegans
Exon131495   163   IV: 7666316-7666478 Caenorhabditis elegans
Exon131496   198   IV: 7666527-7666724 Caenorhabditis elegans
Exon131497   202   IV: 7666840-7667041 Caenorhabditis elegans
Exon131498   439   IV: 7667092-7667530 Caenorhabditis elegans
Exon131499   303   IV: 7667583-7667885 Caenorhabditis elegans
Exon131500   347   IV: 7667937-7668283 Caenorhabditis elegans
Exon131502   412   IV: 7668327-7668738 Caenorhabditis elegans
Exon131503   166   IV: 7668783-7668948 Caenorhabditis elegans
Exon131504   173   IV: 7669002-7669174 Caenorhabditis elegans
Exon131505   114   IV: 7669221-7669334 Caenorhabditis elegans
Exon131506   164   IV: 7669380-7669543 Caenorhabditis elegans
Exon131507   574   IV: 7669593-7670166 Caenorhabditis elegans
Exon131508   180   IV: 7670251-7670430 Caenorhabditis elegans
Exon131509   433   IV: 7670478-7670910 Caenorhabditis elegans
Exon131510   104   IV: 7670957-7671060 Caenorhabditis elegans
Exon131511   192   IV: 7671108-7671299 Caenorhabditis elegans
Exon131512   693   IV: 7671360-7672052 Caenorhabditis elegans
Exon131514   70   IV: 7672511-7672580 Caenorhabditis elegans
Exon131515   276   IV: 7672697-7672972 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08G9.2.1 7664157 7672972 -1

1 Sequence

Length
6883

1 Sequence Ontology Term

Identifier Name Description
transcript