WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49H3.6a.1 Sequence Name  C49H3.6a.1
Length (nt)  1912   Chromosome Location  IV: 7903740-7907093
Chromosome . Primary Identifier  IV Chromosome Location . Start  7903740
Chromosome Location . End  7907093 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49H3.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016792 C49H3.6 C49H3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49H3.6a C49H3.6a 1659   IV: 7903777-7903830

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49H3.6a.1 7903740 7907093 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132251   91   IV: 7903740-7903830 Caenorhabditis elegans
Exon132252   363   IV: 7904021-7904383 Caenorhabditis elegans
Exon132254   74   IV: 7904439-7904512 Caenorhabditis elegans
Exon132256   269   IV: 7904599-7904867 Caenorhabditis elegans
Exon132258   230   IV: 7904915-7905144 Caenorhabditis elegans
Exon132260   224   IV: 7905426-7905649 Caenorhabditis elegans
Exon132262   188   IV: 7905741-7905928 Caenorhabditis elegans
Exon132264   162   IV: 7906035-7906196 Caenorhabditis elegans
Exon132265   311   IV: 7906783-7907093 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49H3.6a.1 7903740 7907093 1

1 Sequence

Length
1912

1 Sequence Ontology Term

Identifier Name Description
transcript