WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C49H3.6a Sequence Name  C49H3.6a
Length (nt)  1659   Chromosome Location  IV: 7903777-7903830
Chromosome . Primary Identifier  IV Chromosome Location . Start  7903777
Chromosome Location . End  7903830
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49H3.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30506 C49H3.6, isoform a 61.2 552 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00082920
WBRNAi00042840
WBRNAi00012168
WBRNAi00030001
WBRNAi00062171

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C49H3.6a 7903777 7903830 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016792 C49H3.6 C49H3.6 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:C49H3.6a 7903777 7903830 1
CDS:C49H3.6a 7904021 7904383 1
CDS:C49H3.6a 7904439 7904512 1
CDS:C49H3.6a 7904599 7904867 1
CDS:C49H3.6a 7904915 7905144 1
CDS:C49H3.6a 7905426 7905649 1
CDS:C49H3.6a 7905741 7905928 1
CDS:C49H3.6a 7906035 7906196 1
CDS:C49H3.6a 7906783 7906877 1

1 Sequence

Length
1659

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C49H3.6a.1 C49H3.6a.1 1912   IV: 7903740-7907093