WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18F3.2a.1 Sequence Name  C18F3.2a.1
Length (nt)  4942   Chromosome Location  IV: 8066865-8084033
Chromosome . Primary Identifier  IV Chromosome Location . Start  8066865
Chromosome Location . End  8084033 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18F3.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004732 sax-7 C18F3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18F3.2a C18F3.2a 3435   IV: 8067102-8067188

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18F3.2a.1 8066865 8084033 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132754   324   IV: 8066865-8067188 Caenorhabditis elegans
Exon132758   103   IV: 8067259-8067361 Caenorhabditis elegans
Exon132761   97   IV: 8070036-8070132 Caenorhabditis elegans
Exon132766   191   IV: 8074117-8074307 Caenorhabditis elegans
Exon132770   291   IV: 8074863-8075153 Caenorhabditis elegans
Exon132774   285   IV: 8075921-8076205 Caenorhabditis elegans
Exon132779   291   IV: 8076453-8076743 Caenorhabditis elegans
Exon132783   269   IV: 8076958-8077226 Caenorhabditis elegans
Exon132787   805   IV: 8077770-8078574 Caenorhabditis elegans
Exon132791   333   IV: 8078814-8079146 Caenorhabditis elegans
Exon132798   171   IV: 8081435-8081605 Caenorhabditis elegans
Exon132804   322   IV: 8082014-8082335 Caenorhabditis elegans
Exon132810   116   IV: 8082521-8082636 Caenorhabditis elegans
Exon132821   1344   IV: 8082690-8084033 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18F3.2a.1 8066865 8084033 1

1 Sequence

Length
4942

1 Sequence Ontology Term

Identifier Name Description
transcript