WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42G8.11.1 Sequence Name  F42G8.11.1
Length (nt)  817   Chromosome Location  IV: 8132175-8133558
Chromosome . Primary Identifier  IV Chromosome Location . Start  8132175
Chromosome Location . End  8133558 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42G8.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004979 sph-1 F42G8.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42G8.11 F42G8.11 684   IV: 8132297-8132398

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42G8.11.1 8132175 8133558 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132872   224   IV: 8132175-8132398 Caenorhabditis elegans
Exon132873   388   IV: 8132445-8132832 Caenorhabditis elegans
Exon132874   119   IV: 8133298-8133416 Caenorhabditis elegans
Exon132877   86   IV: 8133473-8133558 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42G8.11.1 8132175 8133558 -1

1 Sequence

Length
817

1 Sequence Ontology Term

Identifier Name Description
transcript