WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F42G8.11 Sequence Name  F42G8.11
Length (nt)  684   Chromosome Location  IV: 8132297-8132398
Chromosome . Primary Identifier  IV Chromosome Location . Start  8132297
Chromosome Location . End  8132398
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42G8.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40059 SPH-1 25.4 227 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047123
WBRNAi00014841
WBRNAi00032152

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F42G8.11 8132297 8132398 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004979 sph-1 F42G8.11 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F42G8.11 8132297 8132398 -1
CDS:F42G8.11 8132445 8132832 -1
CDS:F42G8.11 8133298 8133416 -1
CDS:F42G8.11 8133473 8133547 -1

1 Sequence

Length
684

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F42G8.11.1 F42G8.11.1 817   IV: 8132175-8133558