WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07G1.4a.1 Sequence Name  C07G1.4a.1
Length (nt)  2290   Chromosome Location  IV: 8188904-8198951
Chromosome . Primary Identifier  IV Chromosome Location . Start  8188904
Chromosome Location . End  8198951 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07G1.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006957 wsp-1 C07G1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07G1.4a C07G1.4a 1824   IV: 8189346-8189522

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07G1.4a.1 8188904 8198951 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133052   619   IV: 8188904-8189522 Caenorhabditis elegans
Exon133054   123   IV: 8189578-8189700 Caenorhabditis elegans
Exon133056   264   IV: 8189746-8190009 Caenorhabditis elegans
Exon133058   196   IV: 8190058-8190253 Caenorhabditis elegans
Exon133060   270   IV: 8190707-8190976 Caenorhabditis elegans
Exon133062   109   IV: 8191025-8191133 Caenorhabditis elegans
Exon133064   147   IV: 8191371-8191517 Caenorhabditis elegans
Exon133068   91   IV: 8197428-8197518 Caenorhabditis elegans
Exon133069   354   IV: 8198277-8198630 Caenorhabditis elegans
Exon133070   117   IV: 8198835-8198951 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07G1.4a.1 8188904 8198951 -1

1 Sequence

Length
2290

1 Sequence Ontology Term

Identifier Name Description
transcript