WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C07G1.4a Sequence Name  C07G1.4a
Length (nt)  1824   Chromosome Location  IV: 8189346-8189522
Chromosome . Primary Identifier  IV Chromosome Location . Start  8189346
Chromosome Location . End  8189522
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07G1.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32572 WSP-1, isoform a 65.1 607 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00107859
WBRNAi00083311
WBRNAi00083308
WBRNAi00083312
WBRNAi00108185
WBRNAi00040015
WBRNAi00083306
WBRNAi00010399
WBRNAi00083297
WBRNAi00028642
WBRNAi00080226
WBRNAi00080229
WBRNAi00065964
WBRNAi00080225
WBRNAi00080228
WBRNAi00083303
WBRNAi00083319
WBRNAi00117956

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C07G1.4a 8189346 8189522 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006957 wsp-1 C07G1.4 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:C07G1.4a 8189346 8189522 -1
CDS:C07G1.4a 8189578 8189700 -1
CDS:C07G1.4a 8189746 8190009 -1
CDS:C07G1.4a 8190058 8190253 -1
CDS:C07G1.4a 8190707 8190976 -1
CDS:C07G1.4a 8191025 8191133 -1
CDS:C07G1.4a 8191371 8191517 -1
CDS:C07G1.4a 8197428 8197518 -1
CDS:C07G1.4a 8198277 8198630 -1
CDS:C07G1.4a 8198835 8198927 -1

1 Sequence

Length
1824

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C07G1.4a.1 C07G1.4a.1 2290   IV: 8188904-8198951