WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2096.2a.1 Sequence Name  D2096.2a.1
Length (nt)  742   Chromosome Location  IV: 8379984-8381885
Chromosome . Primary Identifier  IV Chromosome Location . Start  8379984
Chromosome Location . End  8381885 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2096.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017070 praf-3 D2096.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2096.2a D2096.2a 561   IV: 8379990-8380088

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2096.2a.1 8379984 8381885 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133561   105   IV: 8379984-8380088 Caenorhabditis elegans
Exon133564   210   IV: 8380274-8380483 Caenorhabditis elegans
Exon133569   98   IV: 8380883-8380980 Caenorhabditis elegans
Exon133571   329   IV: 8381557-8381885 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2096.2a.1 8379984 8381885 1

1 Sequence

Length
742

1 Sequence Ontology Term

Identifier Name Description
transcript