WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D2096.2a Sequence Name  D2096.2a
Length (nt)  561   Chromosome Location  IV: 8379990-8380088
Chromosome . Primary Identifier  IV Chromosome Location . Start  8379990
Chromosome Location . End  8380088
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2096.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29245 PRAF-3, isoform a 21.0 186 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00043527
WBRNAi00012605
WBRNAi00030430
WBRNAi00103240

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D2096.2a 8379990 8380088 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017070 praf-3 D2096.2 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:D2096.2a 8379990 8380088 1
CDS:D2096.2a 8380274 8380483 1
CDS:D2096.2a 8380883 8380980 1
CDS:D2096.2a 8381557 8381710 1

1 Sequence

Length
561

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D2096.2a.1 D2096.2a.1 742   IV: 8379984-8381885