WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C28C12.10a Sequence Name  C28C12.10a
Length (nt)  3084   Chromosome Location  IV: 8503674-8503971
Chromosome . Primary Identifier  IV Chromosome Location . Start  8503674
Chromosome Location . End  8503971
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28C12.10a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53883 TAG-77, isoform a 118.1 1027 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00041395
WBRNAi00001877
WBRNAi00011290
WBRNAi00078218

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C28C12.10a 8503674 8503971 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006450 tag-77 C28C12.10 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C28C12.10a 8503674 8503971 -1
CDS:C28C12.10a 8504057 8504258 -1
CDS:C28C12.10a 8504312 8504411 -1
CDS:C28C12.10a 8504492 8505208 -1
CDS:C28C12.10a 8505277 8505525 -1
CDS:C28C12.10a 8505569 8505889 -1
CDS:C28C12.10a 8505944 8506219 -1
CDS:C28C12.10a 8506368 8506467 -1
CDS:C28C12.10a 8506792 8507016 -1
CDS:C28C12.10a 8507093 8507331 -1
CDS:C28C12.10a 8509187 8509401 -1
CDS:C28C12.10a 8510399 8510540 -1

1 Sequence

Length
3084

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C28C12.10a.1 C28C12.10a.1 3274   IV: 8503492-8510548