WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F42A9.1b Sequence Name  F42A9.1b
Length (nt)  3867   Chromosome Location  IV: 8631433-8631528
Chromosome . Primary Identifier  IV Chromosome Location . Start  8631433
Chromosome Location . End  8631528
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A9.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43788 DGK-4, isoform b 143.1 1288 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00001004
WBRNAi00047073
WBRNAi00047074
WBRNAi00014806
WBRNAi00014813

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F42A9.1b 8631433 8631528 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006483 dgk-4 F42A9.1 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:F42A9.1b 8631433 8631528 1
CDS:F42A9.1b 8631977 8632036 1
CDS:F42A9.1b 8632080 8632161 1
CDS:F42A9.1b 8632208 8632314 1
CDS:F42A9.1b 8632521 8632619 1
CDS:F42A9.1b 8632984 8633146 1
CDS:F42A9.1b 8633434 8633581 1
CDS:F42A9.1b 8633804 8634075 1
CDS:F42A9.1b 8634192 8634420 1
CDS:F42A9.1b 8634478 8634778 1
CDS:F42A9.1b 8634885 8635407 1
CDS:F42A9.1b 8635487 8635646 1
CDS:F42A9.1b 8636500 8636851 1
CDS:F42A9.1b 8637380 8637850 1
CDS:F42A9.1b 8641785 8641940 1
CDS:F42A9.1b 8642484 8642670 1
CDS:F42A9.1b 8642748 8642920 1
CDS:F42A9.1b 8643030 8643317 1

1 Sequence

Length
3867

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F42A9.1b.1 F42A9.1b.1 4666   IV: 8631333-8644016