WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20C5.1i.1 Sequence Name  F20C5.1i.1
Length (nt)  2628   Chromosome Location  IV: 8746252-8752676
Chromosome . Primary Identifier  IV Chromosome Location . Start  8746252
Chromosome Location . End  8752676 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20C5.1i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004051 parg-1 F20C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20C5.1i F20C5.1i 2355   IV: 8746292-8746336

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20C5.1i.1 8746252 8752676 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134565   85   IV: 8746252-8746336 Caenorhabditis elegans
Exon134575   441   IV: 8746382-8746822 Caenorhabditis elegans
Exon134579   171   IV: 8747766-8747936 Caenorhabditis elegans
Exon134590   60   IV: 8748212-8748271 Caenorhabditis elegans
Exon134601   223   IV: 8748631-8748853 Caenorhabditis elegans
Exon134610   68   IV: 8748901-8748968 Caenorhabditis elegans
Exon134619   93   IV: 8749947-8750039 Caenorhabditis elegans
Exon134628   168   IV: 8750087-8750254 Caenorhabditis elegans
Exon134637   116   IV: 8750439-8750554 Caenorhabditis elegans
Exon134646   283   IV: 8750854-8751136 Caenorhabditis elegans
Exon134655   124   IV: 8751188-8751311 Caenorhabditis elegans
Exon134663   291   IV: 8751363-8751653 Caenorhabditis elegans
Exon134672   129   IV: 8752084-8752212 Caenorhabditis elegans
Exon134680   376   IV: 8752301-8752676 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20C5.1i.1 8746252 8752676 1

1 Sequence

Length
2628

1 Sequence Ontology Term

Identifier Name Description
transcript