WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20C5.1a.1 Sequence Name  F20C5.1a.1
Length (nt)  2616   Chromosome Location  IV: 8746254-8752675
Chromosome . Primary Identifier  IV Chromosome Location . Start  8746254
Chromosome Location . End  8752675 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20C5.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004051 parg-1 F20C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20C5.1a F20C5.1a 2346   IV: 8746292-8746336

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20C5.1a.1 8746254 8752675 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134566   83   IV: 8746254-8746336 Caenorhabditis elegans
Exon134569   441   IV: 8746382-8746822 Caenorhabditis elegans
Exon134580   162   IV: 8747775-8747936 Caenorhabditis elegans
Exon134586   60   IV: 8748212-8748271 Caenorhabditis elegans
Exon134593   223   IV: 8748631-8748853 Caenorhabditis elegans
Exon134602   68   IV: 8748901-8748968 Caenorhabditis elegans
Exon134611   93   IV: 8749947-8750039 Caenorhabditis elegans
Exon134620   168   IV: 8750087-8750254 Caenorhabditis elegans
Exon134629   116   IV: 8750439-8750554 Caenorhabditis elegans
Exon134638   283   IV: 8750854-8751136 Caenorhabditis elegans
Exon134647   124   IV: 8751188-8751311 Caenorhabditis elegans
Exon134656   291   IV: 8751363-8751653 Caenorhabditis elegans
Exon134665   129   IV: 8752084-8752212 Caenorhabditis elegans
Exon134675   375   IV: 8752301-8752675 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20C5.1a.1 8746254 8752675 1

1 Sequence

Length
2616

1 Sequence Ontology Term

Identifier Name Description
transcript