WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20C5.1d.1 Sequence Name  F20C5.1d.1
Length (nt)  2118   Chromosome Location  IV: 8746292-8751697
Chromosome . Primary Identifier  IV Chromosome Location . Start  8746292
Chromosome Location . End  8751697 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20C5.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004051 parg-1 F20C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20C5.1d F20C5.1d 2118   IV: 8746292-8746336

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20C5.1d.1 8746292 8751697 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134568   45   IV: 8746292-8746336 Caenorhabditis elegans
Exon134571   441   IV: 8746382-8746822 Caenorhabditis elegans
Exon134582   162   IV: 8747775-8747936 Caenorhabditis elegans
Exon134588   60   IV: 8748212-8748271 Caenorhabditis elegans
Exon134596   223   IV: 8748631-8748853 Caenorhabditis elegans
Exon134605   68   IV: 8748901-8748968 Caenorhabditis elegans
Exon134614   93   IV: 8749947-8750039 Caenorhabditis elegans
Exon134623   168   IV: 8750087-8750254 Caenorhabditis elegans
Exon134632   116   IV: 8750439-8750554 Caenorhabditis elegans
Exon134641   283   IV: 8750854-8751136 Caenorhabditis elegans
Exon134650   124   IV: 8751188-8751311 Caenorhabditis elegans
Exon134664   335   IV: 8751363-8751697 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20C5.1d.1 8746292 8751697 1

1 Sequence

Length
2118

1 Sequence Ontology Term

Identifier Name Description
transcript