WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20C5.1e.1 Sequence Name  F20C5.1e.1
Length (nt)  1815   Chromosome Location  IV: 8747820-8752443
Chromosome . Primary Identifier  IV Chromosome Location . Start  8747820
Chromosome Location . End  8752443 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20C5.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004051 parg-1 F20C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20C5.1e F20C5.1e 1815   IV: 8747820-8747936

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20C5.1e.1 8747820 8752443 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134585   117   IV: 8747820-8747936 Caenorhabditis elegans
Exon134589   60   IV: 8748212-8748271 Caenorhabditis elegans
Exon134597   223   IV: 8748631-8748853 Caenorhabditis elegans
Exon134606   68   IV: 8748901-8748968 Caenorhabditis elegans
Exon134615   93   IV: 8749947-8750039 Caenorhabditis elegans
Exon134624   168   IV: 8750087-8750254 Caenorhabditis elegans
Exon134633   116   IV: 8750439-8750554 Caenorhabditis elegans
Exon134642   283   IV: 8750854-8751136 Caenorhabditis elegans
Exon134651   124   IV: 8751188-8751311 Caenorhabditis elegans
Exon134659   291   IV: 8751363-8751653 Caenorhabditis elegans
Exon134668   129   IV: 8752084-8752212 Caenorhabditis elegans
Exon134674   143   IV: 8752301-8752443 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20C5.1e.1 8747820 8752443 1

1 Sequence

Length
1815

1 Sequence Ontology Term

Identifier Name Description
transcript