WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T11B7.4b Sequence Name  T11B7.4b
Length (nt)  1938   Chromosome Location  IV: 8852514-8852612
Chromosome . Primary Identifier  IV Chromosome Location . Start  8852514
Chromosome Location . End  8852612
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T11B7.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35945 ALP-1, isoform b 70.4 645 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00001688
WBRNAi00002262
WBRNAi00053101
WBRNAi00053102
WBRNAi00079868
WBRNAi00018585
WBRNAi00035468

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:T11B7.4b 8852514 8852612 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001132 alp-1 T11B7.4 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier 		Start End Strand
CDS:T11B7.4b 8852514 8852612 1
CDS:T11B7.4b 8853119 8853264 1
CDS:T11B7.4b 8854660 8854768 1
CDS:T11B7.4b 8854899 8855056 1
CDS:T11B7.4b 8856475 8856645 1
CDS:T11B7.4b 8856719 8856822 1
CDS:T11B7.4b 8856876 8856951 1
CDS:T11B7.4b 8857003 8857173 1
CDS:T11B7.4b 8857219 8857445 1
CDS:T11B7.4b 8860546 8860723 1
CDS:T11B7.4b 8860966 8861225 1
CDS:T11B7.4b 8861276 8861439 1
CDS:T11B7.4b 8861956 8862030 1

1 Sequence

Length
1938

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T11B7.4b.1 T11B7.4b.1 2168   IV: 8852500-8862246